Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [acyl-carrier-protein] s-malonyltransferase | HMPREF9720_0348 | Not Available | Negative | 980238 - 981119 | 30908.4 |
| hypothetical protein | HMPREF9720_0350 | Not Available | Positive | 981559 - 982269 | 25752.1 |
| hypothetical protein | HMPREF9720_0351 | Not Available | Positive | 982410 - 983138 | 26442.6 |
| glucosamine-6-phosphate deaminase | HMPREF9720_0352 | Not Available | Negative | 983335 - 984126 | 29327.0 |
| glucosamine-6-phosphate deaminase-like protein | HMPREF9720_0353 | Not Available | Negative | 984183 - 986132 | 73711.2 |
| hypothetical protein | HMPREF9720_0354 | Not Available | Negative | 986129 - 986779 | 24708.5 |
| mucin-desulfating sulfatase | HMPREF9720_0355 | Not Available | Negative | 986776 - 987951 | 44536.5 |
| putative mannose-6-phosphate isomerase, class i | HMPREF9720_0356 | Not Available | Negative | 988116 - 989081 | 35480.2 |
| rok family protein | HMPREF9720_0357 | Not Available | Negative | 989089 - 990198 | 39894.9 |
| transporter, major facilitator family protein | HMPREF9720_0358 | Not Available | Negative | 990209 - 991378 | 41883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
