Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0328 | Not Available | Negative | 958524 - 958649 | 4977.12 |
| hypothetical protein | HMPREF9720_0329 | Not Available | Positive | 958666 - 960234 | 56076.5 |
| abc transporter, atp-binding protein | HMPREF9720_0330 | Not Available | Positive | 960302 - 960949 | 23703.5 |
| hypothetical protein | HMPREF9720_0331 | Not Available | Positive | 960946 - 962142 | 43700.6 |
| ribulose-phosphate 3-epimerase | HMPREF9720_0332 | Not Available | Positive | 962289 - 962939 | 23202.1 |
| hdig domain protein | HMPREF9720_0333 | Not Available | Negative | 962929 - 963489 | 21027.0 |
| abc transporter, atp-binding protein | HMPREF9720_0334 | Not Available | Positive | 963644 - 965629 | 74906.1 |
| rna methyltransferase, trmh family, group 3 | HMPREF9720_0335 | Not Available | Positive | 965692 - 966423 | 26351.1 |
| hypothetical protein | HMPREF9720_0336 | Not Available | Positive | 966454 - 968172 | 65588.4 |
| hypothetical protein | HMPREF9720_0337 | Not Available | Positive | 968169 - 968741 | 21578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
