Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0318 | Not Available | Positive | 945473 - 946552 | 37341.6 |
| hypothetical protein | HMPREF9720_0319 | Not Available | Positive | 946552 - 947037 | 18773.2 |
| excinuclease abc, b subunit | HMPREF9720_0320 | Not Available | Negative | 947146 - 949221 | 78457.5 |
| dna primase | HMPREF9720_0321 | Not Available | Positive | 949390 - 951363 | 74372.1 |
| ssra-binding protein | HMPREF9720_0322 | Not Available | Positive | 951541 - 952035 | 19162.2 |
| cof-like hydrolase | HMPREF9720_0323 | Not Available | Positive | 952032 - 952808 | 27687.0 |
| universal bacterial protein yeaz | HMPREF9720_0324 | Not Available | Positive | 952866 - 953573 | 25481.3 |
| hypothetical protein | HMPREF9720_0325 | Not Available | Positive | 953589 - 954155 | 21049.0 |
| glycosyl hydrolase, family 31 | HMPREF9720_0326 | Not Available | Negative | 954273 - 956888 | 99727.6 |
| rmuc domain protein | HMPREF9720_0327 | Not Available | Negative | 957004 - 958485 | 54968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
