Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0308 | Not Available | Negative | 937028 - 938041 | 36391.0 |
| holliday junction dna helicase ruvb | HMPREF9720_0309 | Not Available | Negative | 938078 - 939085 | 36629.2 |
| hypothetical protein | HMPREF9720_0310 | Not Available | Negative | 939251 - 939943 | 26228.4 |
| sigma-70 region 2 | HMPREF9720_0311 | Not Available | Positive | 940086 - 940634 | 21012.0 |
| hypothetical protein | HMPREF9720_0312 | Not Available | Positive | 940638 - 941936 | 46325.6 |
| Trna-arg | Not Available | Not Available | Positive | 942171 - 942245 | Not Available |
| hypothetical protein | HMPREF9720_0314 | Not Available | Positive | 942347 - 942919 | 20883.5 |
| riboflavin synthase, alpha subunit | HMPREF9720_0315 | Not Available | Positive | 942925 - 943521 | 22107.3 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_0316 | Not Available | Positive | 943524 - 944573 | 39414.0 |
| prolipoprotein diacylglyceryl transferase | HMPREF9720_0317 | Not Available | Positive | 944607 - 945476 | 32589.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
