Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 2, sugar binding domain protein | HMPREF9720_1517 | Not Available | Negative | 922364 - 924448 | 77687.8 |
| hypothetical protein | HMPREF9720_1518 | Not Available | Negative | 924849 - 927836 | 107646.0 |
| hypothetical protein | HMPREF9720_1606 | Not Available | Positive | 928193 - 928960 | 29860.3 |
| hypothetical protein | HMPREF9720_1607 | Not Available | Positive | 929368 - 930207 | 31248.9 |
| sigma-54 interaction domain protein | HMPREF9720_0302 | Not Available | Positive | 930301 - 931190 | 33126.8 |
| hypothetical protein | HMPREF9720_0303 | Not Available | Negative | 931486 - 931803 | 11613.5 |
| gtp-binding protein typa | HMPREF9720_0304 | Not Available | Negative | 931814 - 933616 | 66910.8 |
| 3-dehydroquinate synthase | HMPREF9720_0305 | Not Available | Positive | 933700 - 934716 | 36456.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | HMPREF9720_0306 | Not Available | Negative | 934789 - 936069 | 46140.8 |
| hypothetical protein | HMPREF9720_0307 | Not Available | Negative | 936142 - 936984 | 30296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
