Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation protein csta | HMPREF9720_1487 | Not Available | Positive | 890137 - 891702 | 56629.0 |
| hypothetical protein | HMPREF9720_1488 | Not Available | Positive | 891683 - 892375 | 26708.2 |
| fcd domain protein | HMPREF9720_1489 | Not Available | Negative | 892480 - 893196 | 27343.3 |
| thymidine kinase | HMPREF9720_1490 | Not Available | Negative | 893232 - 893813 | 21825.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | HMPREF9720_1492 | Not Available | Negative | 893842 - 895449 | 59735.1 |
| ribosomal protein l34 | HMPREF9720_1491 | Not Available | Positive | 895402 - 895563 | 6269.68 |
| acetyltransferase, gnat family | HMPREF9720_1493 | Not Available | Positive | 895710 - 896207 | 19301.4 |
| hypothetical protein | HMPREF9720_1494 | Not Available | Negative | 896361 - 896927 | 21647.2 |
| cation diffusion facilitator family transporter | HMPREF9720_1495 | Not Available | Negative | 896940 - 899183 | 82305.4 |
| hypothetical protein | HMPREF9720_1496 | Not Available | Negative | 899214 - 899336 | 4275.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
