Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1568 | Not Available | Positive | 72674 - 73090 | 15645.1 |
| muts domain v protein | HMPREF9720_1569 | Not Available | Positive | 73199 - 74782 | 58950.5 |
| acyltransferase | HMPREF9720_1570 | Not Available | Negative | 74828 - 75961 | 41667.8 |
| hydrolase, nudix family | HMPREF9720_1571 | Not Available | Negative | 75967 - 76593 | 23017.2 |
| peptidase, s9a/b/c family, catalytic domain protein | HMPREF9720_1572 | Not Available | Positive | 76648 - 78780 | 79963.0 |
| gram-positive signal peptide protein, ysirk family | HMPREF9720_1573 | Not Available | Positive | 79178 - 81532 | 84054.1 |
| hypothetical protein | HMPREF9720_1574 | Not Available | Positive | 81967 - 84426 | 87867.4 |
| hypothetical protein | HMPREF9720_1575 | Not Available | Positive | 84893 - 85672 | 27532.5 |
| hypothetical protein | HMPREF9720_1576 | Not Available | Positive | 85694 - 87424 | 62813.2 |
| hypothetical protein | HMPREF9720_1577 | Not Available | Positive | 87451 - 89553 | 76119.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
