Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain protein | HMPREF9720_1477 | Not Available | Positive | 880162 - 880554 | 14938.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_1478 | Not Available | Positive | 880566 - 882557 | 73699.1 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_1479 | Not Available | Positive | 882930 - 884180 | 46015.5 |
| rnd transporter, hae1 family | HMPREF9720_1480 | Not Available | Positive | 884184 - 887279 | 112317.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | HMPREF9720_1481 | Not Available | Positive | 887276 - 888652 | 51059.0 |
| hypothetical protein | HMPREF9720_1482 | Not Available | Negative | 888904 - 889230 | 11619.5 |
| cold-shock dna-binding domain protein | HMPREF9720_1483 | Not Available | Negative | 889262 - 889699 | 16256.2 |
| hypothetical protein | HMPREF9720_1484 | Not Available | Positive | 889722 - 889856 | 4985.11 |
| hypothetical protein | HMPREF9720_1485 | Not Available | Positive | 889871 - 890011 | 5586.91 |
| Trna-thr | Not Available | Not Available | Positive | 890038 - 890113 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
