Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 20, catalytic domain protein | HMPREF9720_1447 | Not Available | Negative | 842369 - 844675 | 85601.4 |
| hypothetical protein | HMPREF9720_1448 | Not Available | Negative | 844760 - 846073 | 47766.3 |
| hypothetical protein | HMPREF9720_1449 | Not Available | Negative | 846092 - 847222 | 42362.6 |
| hypothetical protein | HMPREF9720_1450 | Not Available | Negative | 847277 - 848875 | 60011.7 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1451 | Not Available | Negative | 848894 - 850924 | 76484.0 |
| tonb-dependent receptor plug domain protein | HMPREF9720_1452 | Not Available | Negative | 851016 - 852194 | 41321.4 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_1453 | Not Available | Negative | 852363 - 853307 | 35765.8 |
| rna polymerase sigma-70 factor | HMPREF9720_1454 | Not Available | Negative | 853400 - 853990 | 23125.0 |
| bifunctional protein folc | HMPREF9720_1455 | Not Available | Negative | 854239 - 855528 | 47174.5 |
| apolipoprotein n-acyltransferase | HMPREF9720_1456 | Not Available | Negative | 855544 - 857130 | 59002.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
