Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1416 | Not Available | Positive | 816179 - 817360 | 45597.9 |
| sigma-70 region 2 | HMPREF9720_1418 | Not Available | Positive | 817351 - 817914 | 22214.3 |
| 16s rrna methyltransferase gidb | HMPREF9720_1419 | Not Available | Positive | 817942 - 818565 | 23562.5 |
| hypothetical protein | HMPREF9720_1420 | Not Available | Negative | 818591 - 818830 | 9213.06 |
| hypothetical protein | HMPREF9720_1421 | Not Available | Negative | 818913 - 819158 | 9752.74 |
| hypothetical protein | HMPREF9720_1422 | Not Available | Negative | 819189 - 819302 | 4307.23 |
| methyltransferase domain protein | HMPREF9720_1423 | Not Available | Positive | 820312 - 821181 | 32332.2 |
| thioredoxin | HMPREF9720_1424 | Not Available | Negative | 821156 - 821572 | 15478.1 |
| 23s rrna m2a2503 methyltransferase | HMPREF9720_1425 | Not Available | Negative | 821611 - 822750 | 42411.2 |
| tonb-dependent receptor | HMPREF9720_1426 | Not Available | Positive | 822803 - 823486 | 25833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
