Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 1 family protein | HMPREF9720_1406 | Not Available | Positive | 804934 - 806034 | 42300.0 |
| glycosyltransferase, group 1 family protein | HMPREF9720_1407 | Not Available | Positive | 806036 - 807109 | 40182.6 |
| hypothetical protein | HMPREF9720_1408 | Not Available | Positive | 807143 - 808219 | 40855.6 |
| putative radical sam protein ygiq | HMPREF9720_1409 | Not Available | Negative | 808557 - 810413 | 70145.1 |
| pseudouridine synthase, rlua family | HMPREF9720_1410 | Not Available | Negative | 810679 - 811767 | 41080.7 |
| hypothetical protein | HMPREF9720_1411 | Not Available | Negative | 811767 - 812444 | 24931.7 |
| menaquinone biosynthesis protein, sco4494 family | HMPREF9720_1413 | Not Available | Negative | 812790 - 813872 | 40830.8 |
| permease, yjgp/yjgq family | HMPREF9720_1414 | Not Available | Negative | 813874 - 814977 | 42531.9 |
| pp_00698 | HMPREF9720_1415 | Not Available | Negative | 814984 - 816114 | Not Available |
| hypothetical protein | HMPREF9720_1417 | Not Available | Negative | 816092 - 816211 | 4761.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
