Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase sam-like domain protein | HMPREF9720_1386 | Not Available | Positive | 785685 - 786896 | 45798.5 |
| transcription termination/antitermination factor nusg | HMPREF9720_1387 | Not Available | Positive | 787359 - 787907 | 20810.4 |
| hypothetical protein | HMPREF9720_1388 | Not Available | Positive | 787957 - 788877 | 34749.5 |
| glycosyltransferase, group 4 family | HMPREF9720_1389 | Not Available | Positive | 788962 - 790134 | 42752.9 |
| glucose-1-phosphate thymidylyltransferase | HMPREF9720_1390 | Not Available | Positive | 790223 - 791107 | 32190.5 |
| hypothetical protein | HMPREF9720_1391 | Not Available | Positive | 791237 - 791638 | 15906.7 |
| hypothetical protein | HMPREF9720_1392 | Not Available | Positive | 791607 - 792215 | 23056.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF9720_1393 | Not Available | Positive | 792212 - 792787 | 21737.5 |
| bacterial transferase hexapeptide repeat protein | HMPREF9720_1394 | Not Available | Positive | 792997 - 793503 | 18661.4 |
| dtdp-4-dehydrorhamnose reductase | HMPREF9720_1395 | Not Available | Positive | 793508 - 794368 | 31540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
