Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0296 | Not Available | Negative | 761729 - 762484 | 28600.0 |
| hypothetical protein | HMPREF9720_0297 | Not Available | Positive | 763106 - 763420 | 12285.1 |
| relaxase/mobilization nuclease domain protein | HMPREF9720_0298 | Not Available | Positive | 763405 - 764634 | 47265.6 |
| hypothetical protein | HMPREF9720_0299 | Not Available | Negative | 764727 - 765578 | 32014.1 |
| hypothetical protein | HMPREF9720_0300 | Not Available | Negative | 765563 - 766735 | 43413.2 |
| glycosyl hydrolase, family 92 | HMPREF9720_0301 | Not Available | Negative | 766743 - 767489 | 28428.2 |
| two component regulator propeller | HMPREF9720_1372 | Not Available | Negative | 767499 - 769215 | 64333.9 |
| glycosyl hydrolase family 3 n-terminal domain protein | HMPREF9720_1373 | Not Available | Positive | 769485 - 771767 | 84493.1 |
| hypothetical protein | HMPREF9720_1374 | Not Available | Positive | 771780 - 773717 | 72678.0 |
| hypothetical protein | HMPREF9720_1375 | Not Available | Positive | 773915 - 775459 | 58500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
