Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate/malate dehydrogenase, nad binding domain protein | HMPREF9720_0976 | Not Available | Negative | 750974 - 751972 | 36270.8 |
| hypothetical protein | HMPREF9720_0977 | Not Available | Negative | 752016 - 753113 | 40567.1 |
| recombination protein recr | HMPREF9720_0978 | Not Available | Negative | 753160 - 753756 | 22237.9 |
| tetratricopeptide repeat protein | HMPREF9720_0979 | Not Available | Negative | 753757 - 754575 | 30396.7 |
| batd protein | HMPREF9720_0980 | Not Available | Negative | 754584 - 756440 | 67986.3 |
| hydrolyase, tartrate beta subunit/fumarate domain protein, fe-s type | HMPREF9720_0981 | Not Available | Negative | 756517 - 758130 | 58862.6 |
| fructose-1,6-bisphosphate aldolase, class ii | HMPREF9720_0982 | Not Available | Positive | 758424 - 759416 | 35989.2 |
| conjugative transposon protein trae | HMPREF9720_0293 | Not Available | Negative | 759740 - 759943 | 7157.88 |
| hypothetical protein | HMPREF9720_0294 | Not Available | Negative | 760636 - 761028 | 15063.0 |
| hypothetical protein | HMPREF9720_0295 | Not Available | Negative | 761256 - 761468 | 8278.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
