Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | HMPREF9720_0966 | Not Available | Negative | 741323 - 741853 | 19247.9 |
| tetratricopeptide repeat protein | HMPREF9720_0967 | Not Available | Negative | 741862 - 742545 | 24756.4 |
| hypothetical protein | HMPREF9720_0968 | Not Available | Negative | 742563 - 742724 | 5889.24 |
| dna replication and repair protein recf | HMPREF9720_0969 | Not Available | Positive | 742737 - 744083 | 48993.1 |
| hypothetical protein | HMPREF9720_0970 | Not Available | Positive | 744080 - 744370 | 11197.7 |
| outer membrane protein 40 | HMPREF9720_0971 | Not Available | Negative | 744738 - 745946 | 43405.4 |
| ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent | HMPREF9720_0972 | Not Available | Negative | 746095 - 748650 | 95766.9 |
| putative endoribonuclease l-psp | HMPREF9720_0973 | Not Available | Negative | 748877 - 749251 | 13118.0 |
| meta domain protein | HMPREF9720_0974 | Not Available | Positive | 749329 - 749757 | 15337.9 |
| hypothetical protein | HMPREF9720_0975 | Not Available | Negative | 749817 - 750656 | 32010.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
