Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | HMPREF9720_0956 | Not Available | Positive | 729221 - 730150 | 33947.5 |
| esterase, phb depolymerase family | HMPREF9720_0957 | Not Available | Positive | 730168 - 731064 | 32622.1 |
| atp-dependent chaperone protein clpb | HMPREF9720_0959 | Not Available | Negative | 731207 - 733825 | 98166.7 |
| hypothetical protein | HMPREF9720_0958 | Not Available | Positive | 733779 - 734096 | 11626.8 |
| dna polymerase iii, subunit gamma and tau | HMPREF9720_0960 | Not Available | Positive | 734144 - 736393 | 79189.1 |
| hypothetical protein | HMPREF9720_0961 | Not Available | Positive | 736457 - 736570 | 4063.6 |
| tyrosine--trna ligase | HMPREF9720_0962 | Not Available | Positive | 736525 - 737823 | 48526.5 |
| dihydroneopterin aldolase | HMPREF9720_0963 | Not Available | Positive | 737825 - 738178 | 13413.5 |
| sodium:neurotransmitter symporter family protein | HMPREF9720_0964 | Not Available | Positive | 738231 - 739580 | 48907.6 |
| ser/thr phosphatase family protein | HMPREF9720_0965 | Not Available | Positive | 739632 - 741056 | 53481.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
