Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0946 | Not Available | Positive | 717289 - 718311 | 38877.3 |
| thioredoxin-disulfide reductase | HMPREF9720_0947 | Not Available | Positive | 718334 - 719266 | 33317.7 |
| putative ribonuclease z | HMPREF9720_0948 | Not Available | Positive | 719304 - 720227 | 34027.8 |
| rna methyltransferase, trmh family | HMPREF9720_0949 | Not Available | Positive | 720224 - 720979 | 26928.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | HMPREF9720_0950 | Not Available | Positive | 722009 - 723103 | 39373.8 |
| threonine--trna ligase | HMPREF9720_0951 | Not Available | Positive | 723326 - 725278 | 74391.7 |
| translation initiation factor if-3 | HMPREF9720_0952 | Not Available | Positive | 725567 - 726040 | 18156.6 |
| hypothetical protein | HMPREF9720_0953 | Not Available | Positive | 726116 - 727360 | 45697.2 |
| cytidylyltransferase | HMPREF9720_0954 | Not Available | Positive | 727414 - 728067 | 24893.6 |
| hypothetical protein | HMPREF9720_0955 | Not Available | Negative | 728150 - 729034 | 33774.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
