Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s1 | HMPREF9720_0936 | Not Available | Negative | 703159 - 705051 | 69998.5 |
| ser/thr phosphatase family protein | HMPREF9720_0937 | Not Available | Negative | 705329 - 706753 | 51689.8 |
| phosphoribulokinase/uridine kinase family protein | HMPREF9720_0938 | Not Available | Positive | 706764 - 708494 | 65359.6 |
| glycine dehydrogenase | HMPREF9720_0939 | Not Available | Positive | 708636 - 711461 | 101993.0 |
| hypothetical protein | HMPREF9720_0940 | Not Available | Negative | 711489 - 711998 | 18253.5 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | HMPREF9720_0941 | Not Available | Positive | 712059 - 712598 | 19348.1 |
| pentapeptide repeat protein | HMPREF9720_0942 | Not Available | Positive | 712657 - 713328 | 25674.5 |
| hypothetical protein | HMPREF9720_0943 | Not Available | Positive | 713304 - 714650 | 48214.8 |
| hypothetical protein | HMPREF9720_0944 | Not Available | Positive | 714691 - 716421 | 63513.9 |
| hypothetical protein | HMPREF9720_0945 | Not Available | Positive | 716429 - 717286 | 31107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
