Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2957 | Not Available | Negative | 683201 - 683839 | 22988.5 |
| apurinic endonuclease (apn1) | HMPREF9720_1155 | Not Available | Negative | 684086 - 684934 | 31288.3 |
| hypothetical protein | HMPREF9720_1156 | Not Available | Positive | 685030 - 686274 | 47542.3 |
| peptidase, s41 family | HMPREF9720_1157 | Not Available | Positive | 686318 - 687955 | 60249.9 |
| hypothetical protein | HMPREF9720_1158 | Not Available | Positive | 687948 - 688172 | 8148.94 |
| hypothetical protein | HMPREF9720_1159 | Not Available | Positive | 688574 - 688786 | 7648.08 |
| deoxyribose-phosphate aldolase | HMPREF9720_1161 | Not Available | Negative | 688780 - 689658 | 31755.8 |
| hypothetical protein | HMPREF9720_1160 | Not Available | Positive | 689641 - 689757 | 4370.6 |
| tetratricopeptide repeat protein | HMPREF9720_1162 | Not Available | Negative | 689797 - 691518 | 61573.2 |
| polyribonucleotide nucleotidyltransferase | HMPREF9720_1163 | Not Available | Negative | 691740 - 693974 | 82534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
