Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s20 | HMPREF9720_2947 | Not Available | Positive | 676117 - 676368 | 9327.53 |
| thiamine-phosphate kinase | HMPREF9720_2948 | Not Available | Negative | 676595 - 677632 | 37040.7 |
| adenylate kinase | HMPREF9720_2949 | Not Available | Positive | 677726 - 678298 | 20890.0 |
| hypothetical protein | HMPREF9720_2950 | Not Available | Positive | 678959 - 679873 | 33615.3 |
| ribosomal protein s6 | HMPREF9720_2951 | Not Available | Positive | 680037 - 680381 | 13310.9 |
| ribosomal protein s18 | HMPREF9720_2952 | Not Available | Positive | 680385 - 680663 | 10807.4 |
| ribosomal protein l9 | HMPREF9720_2953 | Not Available | Positive | 680682 - 681122 | 15559.9 |
| putative membrane protein | HMPREF9720_2955 | Not Available | Negative | 681395 - 682315 | 33448.5 |
| hypothetical protein | HMPREF9720_2954 | Not Available | Positive | 682295 - 682534 | 8731.56 |
| hypothetical protein | HMPREF9720_2956 | Not Available | Positive | 682555 - 683076 | 19496.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
