Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1549 | Not Available | Negative | 46891 - 47553 | 24556.3 |
| hypothetical protein | HMPREF9720_1550 | Not Available | Negative | 47754 - 47879 | 4631.78 |
| hypothetical protein | HMPREF9720_1551 | Not Available | Negative | 47852 - 48184 | 12402.8 |
| glutamate--ammonia ligase, catalytic domain protein | HMPREF9720_1552 | Not Available | Negative | 48316 - 50496 | 81694.0 |
| putative methylmalonyl-coa mutase, small subunit | HMPREF9720_1553 | Not Available | Positive | 51079 - 52929 | 68063.8 |
| methylmalonyl-coa mutase | HMPREF9720_1554 | Not Available | Positive | 52932 - 55070 | 77941.6 |
| alcohol dehydrogenase, iron-dependent | HMPREF9720_1555 | Not Available | Negative | 55344 - 56486 | 41931.3 |
| ppic-type ppiase domain protein | HMPREF9720_1556 | Not Available | Negative | 56589 - 58622 | 73206.3 |
| hypothetical protein | HMPREF9720_1557 | Not Available | Negative | 58713 - 59975 | 47966.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 60272 - 60586 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
