Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna binding domain, excisionase family | HMPREF9720_2937 | Not Available | Positive | 666760 - 667098 | 12936.7 |
| hypothetical protein | HMPREF9720_2938 | Not Available | Positive | 667101 - 667472 | 14804.5 |
| vire n-terminal domain protein | HMPREF9720_2939 | Not Available | Positive | 667498 - 668442 | 36497.0 |
| hypothetical protein | HMPREF9720_2940 | Not Available | Negative | 671390 - 672433 | 39199.9 |
| Trna-pro | Not Available | Not Available | Positive | 672639 - 672713 | Not Available |
| hypothetical protein | HMPREF9720_2942 | Not Available | Positive | 672794 - 673063 | 9468.28 |
| hypothetical protein | HMPREF9720_2943 | Not Available | Positive | 672976 - 673947 | 36080.2 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF9720_2944 | Not Available | Positive | 673965 - 674972 | 34672.2 |
| abc transporter, atp-binding protein | HMPREF9720_2945 | Not Available | Positive | 674974 - 675738 | 27166.2 |
| Trna-glu | Not Available | Not Available | Positive | 675838 - 675912 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
