Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, alpha/beta domain protein | HMPREF9720_0493 | Not Available | Positive | 648125 - 648973 | 30789.5 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0494 | Not Available | Negative | 649098 - 650078 | 36863.6 |
| rna polymerase sigma-70 factor | HMPREF9720_0495 | Not Available | Negative | 650118 - 650762 | 24756.6 |
| fibronectin type iii domain protein | HMPREF9720_0496 | Not Available | Negative | 650875 - 653868 | 105563.0 |
| hypothetical protein | HMPREF9720_0497 | Not Available | Negative | 653884 - 654772 | 30843.3 |
| hypothetical protein | HMPREF9720_2030 | Not Available | Positive | 655167 - 655340 | 6668.17 |
| integrase core domain protein | HMPREF9720_2031 | Not Available | Positive | 655364 - 656158 | 31354.3 |
| hypothetical protein | HMPREF9720_2308 | Not Available | Negative | 656197 - 656678 | 17221.9 |
| hypothetical protein | HMPREF9720_2309 | Not Available | Negative | 656675 - 657544 | 32738.1 |
| hypothetical protein | HMPREF9720_2310 | Not Available | Negative | 657547 - 658005 | 17008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
