Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein b | HMPREF9720_0473 | Not Available | Negative | 624536 - 627184 | 97153.5 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | HMPREF9720_0474 | Not Available | Negative | 627263 - 628627 | 50190.9 |
| rnd transporter, hae1 family | HMPREF9720_0475 | Not Available | Negative | 628624 - 631758 | 112024.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_0476 | Not Available | Negative | 631763 - 632875 | 39925.9 |
| hypothetical protein | HMPREF9720_0477 | Not Available | Positive | 633050 - 633223 | 6182.53 |
| arylsulfatase | HMPREF9720_0478 | Not Available | Negative | 633300 - 635012 | 65349.2 |
| outer membrane protein, omp85 family | HMPREF9720_0479 | Not Available | Negative | 635027 - 636229 | 45497.1 |
| hypothetical protein | HMPREF9720_0480 | Not Available | Negative | 636234 - 636752 | 19358.4 |
| doxx family protein | HMPREF9720_0481 | Not Available | Negative | 636856 - 637269 | 15094.8 |
| low molecular weight phosphotyrosine protein phosphatase | HMPREF9720_0482 | Not Available | Positive | 637567 - 638043 | 18215.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
