Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 interaction domain protein | HMPREF9720_2792 | Not Available | Negative | 599694 - 600902 | 44884.1 |
| hypothetical protein | HMPREF9720_2793 | Not Available | Negative | 600903 - 601610 | 25721.5 |
| pyridoxal-dependent decarboxylase, c-terminal sheet domain protein | HMPREF9720_2794 | Not Available | Positive | 601833 - 603227 | 54119.2 |
| abc transporter, atp-binding protein | HMPREF9720_2795 | Not Available | Negative | 603357 - 604958 | 59163.8 |
| hypothetical protein | HMPREF9720_2796 | Not Available | Positive | 605300 - 607216 | 67827.9 |
| hypothetical protein | HMPREF9720_2797 | Not Available | Negative | 607707 - 608093 | 14641.4 |
| putative modification methylase bsobi | HMPREF9720_2798 | Not Available | Negative | 608111 - 609610 | 57502.8 |
| hypothetical protein | HMPREF9720_2799 | Not Available | Negative | 609632 - 609862 | 8316.86 |
| prevent-host-death family protein | HMPREF9720_0461 | Not Available | Positive | 610009 - 611964 | 73387.2 |
| Tmrna,resume consensus sequence (at 88): tacaaatggcaataacag | Not Available | Not Available | Positive | 612380 - 612780 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
