Alistipes sp. HGB5

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. HGB5 is a Gram-negative bacterium characterized by the presence of flagella, which likely contribute to its motility. This organism is notable for having a single replicon, indicating a straightforward genomic structure that may have implications for its replication and genetic stability. The presence of flagella in Alistipes sp. HGB5 suggests adaptations for navigating its environment, which could be essential for nutrient acquisition and colonization within its ecological niche. This motility may also play a role in interactions with other microorganisms, potentially influencing community dynamics in its habitat. The genomic data for Alistipes sp. HGB5 can be accessed from the accession number AENZ00000000.1. This information provides a basis for further exploration of its genetic makeup and functional capabilities, which could reveal additional insights into its biology. Overall, the traits of Alistipes sp. HGB5 highlight its potential ecological role as a motile, Gram-negative bacterium that may contribute to microbial diversity and functionality in its environment. Understanding such traits can enhance our knowledge of microbial ecology and the specific roles different species play in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. HGB5
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. HGB5 contig00005, whole genome shotgun sequence.

Gene Summary

Adenine Count

740743 bp

Thymine Count

730936 bp

Guanine Count

993821 bp

Cytosine Count

999115 bp

Genome Length

3464615 bp

Protein-coding Genes

2946 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54 interaction domain proteinHMPREF9720_2792Not AvailableNegative599694 - 60090244884.1
hypothetical proteinHMPREF9720_2793Not AvailableNegative600903 - 60161025721.5
pyridoxal-dependent decarboxylase, c-terminal sheet domain proteinHMPREF9720_2794Not AvailablePositive601833 - 60322754119.2
abc transporter, atp-binding proteinHMPREF9720_2795Not AvailableNegative603357 - 60495859163.8
hypothetical proteinHMPREF9720_2796Not AvailablePositive605300 - 60721667827.9
hypothetical proteinHMPREF9720_2797Not AvailableNegative607707 - 60809314641.4
putative modification methylase bsobiHMPREF9720_2798Not AvailableNegative608111 - 60961057502.8
hypothetical proteinHMPREF9720_2799Not AvailableNegative609632 - 6098628316.86
prevent-host-death family proteinHMPREF9720_0461Not AvailablePositive610009 - 61196473387.2
Tmrna,resume consensus sequence (at 88): tacaaatggcaataacagNot AvailableNot AvailablePositive612380 - 612780Not Available

Displaying genes 521 – 530 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.