Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruva | HMPREF9720_2782 | Not Available | Negative | 594195 - 594779 | 20638.1 |
| outer membrane protein | HMPREF9720_2783 | Not Available | Positive | 594878 - 595462 | 21247.1 |
| hypothetical protein | HMPREF9720_2784 | Not Available | Positive | 595518 - 595658 | 5050.93 |
| tigr00159 family protein | HMPREF9720_2785 | Not Available | Positive | 595676 - 596476 | 29507.6 |
| hypothetical protein | HMPREF9720_2786 | Not Available | Positive | 596672 - 596845 | 6325.46 |
| acetyltransferase, gnat family | HMPREF9720_2787 | Not Available | Positive | 596842 - 597372 | 20124.3 |
| hypothetical protein | HMPREF9720_2788 | Not Available | Negative | 597632 - 597748 | 4501.49 |
| preprotein translocase, secg subunit | HMPREF9720_2789 | Not Available | Negative | 598221 - 598586 | 12879.8 |
| hypothetical protein | HMPREF9720_2790 | Not Available | Negative | 598598 - 599086 | 18125.3 |
| hypothetical protein | HMPREF9720_2791 | Not Available | Negative | 599099 - 599608 | 18544.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
