Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | HMPREF9720_2761 | Not Available | Positive | 575179 - 576147 | 36230.6 |
| putative thioredoxin | HMPREF9720_2762 | Not Available | Positive | 576159 - 576491 | 13218.0 |
| hypothetical protein | HMPREF9720_2763 | Not Available | Negative | 576502 - 577197 | 24785.6 |
| hypothetical protein | HMPREF9720_2764 | Not Available | Negative | 577206 - 578099 | 31941.4 |
| methyltransferase domain protein | HMPREF9720_2765 | Not Available | Negative | 578152 - 578868 | 26685.0 |
| tigr02757 family protein | HMPREF9720_2766 | Not Available | Negative | 578871 - 579644 | 29780.5 |
| abc transporter, atp-binding protein | HMPREF9720_2767 | Not Available | Negative | 579656 - 580306 | 23800.7 |
| dihydropteroate synthase | HMPREF9720_2768 | Not Available | Negative | 580320 - 581159 | 30523.6 |
| dephospho-coa kinase | HMPREF9720_3053 | Not Available | Negative | 581140 - 582111 | 35716.7 |
| export membrane protein secd | HMPREF9720_3054 | Not Available | Negative | 582220 - 585246 | 109591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
