Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | HMPREF9720_1536 | Not Available | Positive | 33571 - 35181 | 62271.2 |
| carbohydrate binding domain protein | HMPREF9720_1537 | Not Available | Positive | 35162 - 36781 | 59970.8 |
| hypothetical protein | HMPREF9720_1538 | Not Available | Positive | 36805 - 38328 | 54755.2 |
| carbohydrate binding domain protein | HMPREF9720_1539 | Not Available | Positive | 38399 - 38896 | 18750.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_1540 | Not Available | Positive | 38914 - 41637 | 103446.0 |
| ribosomal protein s21 | HMPREF9720_1541 | Not Available | Negative | 42060 - 42251 | 7701.51 |
| competence protein comea helix-hairpin-helix repeat region | HMPREF9720_1542 | Not Available | Negative | 42351 - 43406 | 39585.9 |
| menaquinone biosynthesis decarboxylase, sco4490 family | HMPREF9720_1598 | Not Available | Negative | 43448 - 45259 | 65939.0 |
| putative n-acetylmuramic acid 6-phosphate etherase | HMPREF9720_1547 | Not Available | Negative | 45240 - 46055 | 29357.5 |
| badf/badg/bcra/bcrd atpase family protein | HMPREF9720_1548 | Not Available | Negative | 46018 - 46866 | 30471.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
