Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chain length determinant protein | HMPREF9720_2751 | Not Available | Positive | 564842 - 567301 | 92215.9 |
| hypothetical protein | HMPREF9720_2752 | Not Available | Positive | 567303 - 567692 | 14514.3 |
| hypothetical protein | HMPREF9720_2753 | Not Available | Positive | 567892 - 568026 | 5218.08 |
| hypothetical protein | HMPREF9720_2754 | Not Available | Negative | 568067 - 568978 | 33763.0 |
| peptidase, m23 family | HMPREF9720_2755 | Not Available | Positive | 569098 - 569970 | 32509.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | HMPREF9720_2756 | Not Available | Positive | 569977 - 571128 | 41489.8 |
| rip metalloprotease rsep | HMPREF9720_2757 | Not Available | Positive | 571142 - 572458 | 50142.4 |
| hypothetical protein | HMPREF9720_2758 | Not Available | Positive | 572460 - 573083 | 23252.1 |
| hypothetical protein | HMPREF9720_2759 | Not Available | Positive | 573097 - 573765 | 24463.8 |
| dna repair protein rada | HMPREF9720_2760 | Not Available | Positive | 573776 - 575143 | 49052.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
