Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | HMPREF9720_2741 | Not Available | Negative | 554481 - 555284 | 30173.2 |
| hypothetical protein | HMPREF9720_2743 | Not Available | Negative | 555331 - 555510 | 7116.93 |
| transcriptional regulator, merr family | HMPREF9720_2742 | Not Available | Positive | 555466 - 556353 | 34281.1 |
| tonb-dependent receptor | HMPREF9720_2744 | Not Available | Positive | 556532 - 558904 | 89163.4 |
| hypothetical protein | HMPREF9720_2745 | Not Available | Positive | 559022 - 559891 | 31019.3 |
| putative membrane protein | HMPREF9720_2746 | Not Available | Negative | 559931 - 560842 | 32714.4 |
| lema family protein | HMPREF9720_2747 | Not Available | Negative | 560848 - 561423 | 21508.4 |
| hypothetical protein | HMPREF9720_2748 | Not Available | Negative | 561543 - 562523 | 34651.9 |
| alpha amylase, catalytic domain protein | HMPREF9720_2749 | Not Available | Negative | 562582 - 563865 | 48860.9 |
| polysaccharide biosynthesis/export protein | HMPREF9720_2750 | Not Available | Positive | 564057 - 564833 | 28268.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
