Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2731 | Not Available | Positive | 538455 - 538682 | 8923.96 |
| tetratricopeptide repeat protein | HMPREF9720_2732 | Not Available | Negative | 538843 - 540189 | 49703.7 |
| dna gyrase, a subunit | HMPREF9720_2733 | Not Available | Negative | 540228 - 542783 | 95110.3 |
| formate/nitrite transporter | HMPREF9720_2734 | Not Available | Positive | 542976 - 543914 | 33557.7 |
| hypothetical protein | HMPREF9720_2735 | Not Available | Negative | 544056 - 544778 | 25262.2 |
| ftsk/spoiiie family protein | HMPREF9720_2736 | Not Available | Negative | 545036 - 547990 | 105641.0 |
| glutamate racemase | HMPREF9720_2737 | Not Available | Negative | 548082 - 548855 | 27794.4 |
| shikimate kinase | HMPREF9720_2738 | Not Available | Negative | 548916 - 549440 | 19649.5 |
| dna gyrase/topoisomerase iv, a subunit | HMPREF9720_2739 | Not Available | Negative | 549450 - 552596 | 115557.0 |
| dna topoisomerase iv subunit b | HMPREF9720_2740 | Not Available | Negative | 552603 - 554477 | 70312.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
