Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | HMPREF9720_2721 | Not Available | Negative | 526427 - 527719 | 47414.7 |
| hypothetical protein | HMPREF9720_2722 | Not Available | Negative | 528455 - 529063 | 22548.0 |
| dna ligase (nad+) | HMPREF9720_2723 | Not Available | Positive | 529541 - 531625 | 77530.2 |
| dihydrodipicolinate synthase | HMPREF9720_2724 | Not Available | Positive | 531906 - 532898 | 37151.9 |
| hypothetical protein | HMPREF9720_2725 | Not Available | Positive | 532938 - 533675 | 28396.1 |
| hypothetical protein | HMPREF9720_2726 | Not Available | Positive | 533687 - 534373 | 23818.2 |
| hypothetical protein | HMPREF9720_2727 | Not Available | Positive | 534395 - 535126 | 27545.3 |
| pseudouridylate synthase | HMPREF9720_2728 | Not Available | Negative | 535164 - 536435 | 48604.4 |
| mate efflux family protein | HMPREF9720_2729 | Not Available | Positive | 536612 - 537937 | 48724.5 |
| hypothetical protein | HMPREF9720_2730 | Not Available | Positive | 537943 - 538476 | 19939.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
