Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | HMPREF9720_0871 | Not Available | Positive | 507531 - 508439 | 34875.8 |
| outer membrane protein, omp85 family | HMPREF9720_0872 | Not Available | Negative | 508629 - 511004 | 90796.9 |
| nitroreductase family protein | HMPREF9720_0873 | Not Available | Negative | 511013 - 511759 | 27916.4 |
| diaminopimelate epimerase | HMPREF9720_0874 | Not Available | Positive | 511897 - 512703 | 29720.2 |
| hypothetical protein | HMPREF9720_0875 | Not Available | Positive | 512725 - 512925 | 8028.36 |
| hydrolase, alpha/beta domain protein | HMPREF9720_0876 | Not Available | Positive | 512946 - 513737 | 28733.6 |
| hypothetical protein | HMPREF9720_0877 | Not Available | Positive | 513876 - 514154 | 10745.5 |
| hypothetical protein | HMPREF9720_0878 | Not Available | Positive | 514256 - 514798 | 19324.3 |
| hypothetical protein | HMPREF9720_0879 | Not Available | Positive | 514811 - 515065 | 9336.85 |
| hypothetical protein | HMPREF9720_0880 | Not Available | Negative | 515243 - 516073 | 30148.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
