Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HMPREF9720_0861 | Not Available | Positive | 497817 - 498755 | 33774.1 |
| trna nucleotidyltransferase/poly(a) polymerase family protein | HMPREF9720_0862 | Not Available | Negative | 498813 - 500222 | 52921.2 |
| gdsl-like protein | HMPREF9720_0863 | Not Available | Negative | 500227 - 500880 | 24464.6 |
| pyridoxine 5'-phosphate synthase | HMPREF9720_0865 | Not Available | Negative | 500908 - 501621 | 26122.1 |
| hypothetical protein | HMPREF9720_0864 | Not Available | Positive | 501599 - 501805 | 7612.55 |
| nad(+)/nadh kinase | HMPREF9720_1546 | Not Available | Positive | 501802 - 502680 | 31767.3 |
| di-trans,poly-cis-decaprenylcistransferase | HMPREF9720_1579 | Not Available | Positive | 502747 - 503472 | 27417.5 |
| outer membrane protein assembly complex, yaet protein | HMPREF9720_0868 | Not Available | Positive | 503499 - 506072 | 97395.5 |
| outer membrane protein | HMPREF9720_0869 | Not Available | Positive | 506256 - 506762 | 18739.6 |
| outer membrane protein | HMPREF9720_0870 | Not Available | Positive | 506793 - 507347 | 20283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
