Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell shape determining protein, mreb/mrl family | HMPREF9720_0851 | Not Available | Negative | 488920 - 489939 | 36285.1 |
| nad-dependent glycerol-3-phosphate dehydrogenase c-terminal domain protein | HMPREF9720_0852 | Not Available | Positive | 490137 - 491144 | 37191.9 |
| glucose-6-phosphate isomerase | HMPREF9720_0853 | Not Available | Positive | 491152 - 492483 | 47723.3 |
| hypothetical protein | HMPREF9720_0854 | Not Available | Positive | 492560 - 493426 | 31597.5 |
| php domain protein | HMPREF9720_0855 | Not Available | Negative | 493448 - 494338 | 32221.5 |
| dna-binding regulatory protein, yebc/pmpr family | HMPREF9720_0856 | Not Available | Negative | 494463 - 495188 | 27387.2 |
| glyoxalase family protein | HMPREF9720_0857 | Not Available | Positive | 495341 - 495718 | 14452.0 |
| sua5/ycio/yrdc/ywlc family protein | HMPREF9720_0858 | Not Available | Positive | 495835 - 496416 | 20811.2 |
| thioesterase family protein | HMPREF9720_0859 | Not Available | Positive | 496422 - 496817 | 15132.1 |
| putative membrane protein | HMPREF9720_0860 | Not Available | Negative | 496814 - 497767 | 35267.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
