Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0841 | Not Available | Positive | 474859 - 475278 | 15576.9 |
| hypothetical protein | HMPREF9720_0842 | Not Available | Positive | 475378 - 475572 | 7119.33 |
| pyruvate phosphate dikinase, pep/pyruvate binding domain protein | HMPREF9720_0843 | Not Available | Positive | 475569 - 478562 | 113571.0 |
| glutamate dehydrogenase, nad-specific | HMPREF9720_0844 | Not Available | Positive | 478706 - 480043 | 48832.6 |
| pap2 family protein | HMPREF9720_0845 | Not Available | Negative | 480354 - 481622 | 46594.9 |
| calcium-translocating p-type atpase, pmca-type | HMPREF9720_0846 | Not Available | Negative | 481619 - 484192 | 93956.2 |
| rod shape-determining protein roda | HMPREF9720_0847 | Not Available | Negative | 484206 - 485606 | 51702.1 |
| putative penicillin-binding protein 2 | HMPREF9720_0848 | Not Available | Negative | 485629 - 487455 | 69022.8 |
| rod shape-determining protein mred | HMPREF9720_0849 | Not Available | Negative | 487452 - 487970 | 18978.2 |
| rod shape-determining protein mrec | HMPREF9720_0850 | Not Available | Negative | 487971 - 488825 | 31964.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
