Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_1526 | Not Available | Negative | 21354 - 22355 | 37942.7 |
| rna polymerase sigma-70 factor | HMPREF9720_1527 | Not Available | Negative | 22536 - 23099 | 22196.7 |
| transporter, major facilitator family protein | HMPREF9720_1528 | Not Available | Negative | 23146 - 24534 | 50534.9 |
| hypothetical protein | HMPREF9720_1529 | Not Available | Negative | 25198 - 25335 | 5138.95 |
| hypothetical protein | HMPREF9720_1530 | Not Available | Negative | 25594 - 25737 | 5032.98 |
| hypothetical protein | HMPREF9720_1531 | Not Available | Negative | 25734 - 25913 | 6935.62 |
| putative metabolite transport protein csbc | HMPREF9720_1532 | Not Available | Positive | 26815 - 28143 | 47733.1 |
| kinase, pfkb family | HMPREF9720_1533 | Not Available | Positive | 28145 - 29005 | 31118.1 |
| hypothetical protein | HMPREF9720_1534 | Not Available | Positive | 29031 - 30617 | 59273.0 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1535 | Not Available | Positive | 30635 - 33571 | 107793.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
