Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0821 | Not Available | Negative | 444953 - 445684 | 27798.9 |
| hypothetical protein | HMPREF9720_0822 | Not Available | Negative | 445687 - 446184 | 17358.9 |
| hypothetical protein | HMPREF9720_0823 | Not Available | Negative | 446181 - 446993 | 29390.4 |
| hd domain protein | HMPREF9720_0824 | Not Available | Positive | 447020 - 447685 | 25454.0 |
| rna polymerase sigma-70 factor | HMPREF9720_0825 | Not Available | Positive | 447780 - 448550 | 29858.4 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0826 | Not Available | Positive | 448658 - 449659 | 37770.8 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0827 | Not Available | Positive | 449704 - 453255 | 132254.0 |
| susd family protein | HMPREF9720_0828 | Not Available | Positive | 453286 - 455103 | 68610.7 |
| s1/p1 nuclease | HMPREF9720_0829 | Not Available | Positive | 455196 - 455993 | 30564.3 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_0830 | Not Available | Negative | 456095 - 457024 | 34707.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
