Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0808 | Not Available | Negative | 431863 - 432813 | 35446.3 |
| signal recognition particle-docking protein ftsy | HMPREF9720_0809 | Not Available | Positive | 432854 - 433864 | 36216.3 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0810 | Not Available | Positive | 433984 - 437439 | 127295.0 |
| susd family protein | HMPREF9720_1545 | Not Available | Positive | 437451 - 439082 | 61621.1 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_0815 | Not Available | Positive | 439108 - 439932 | 29897.7 |
| hypothetical protein | HMPREF9720_0816 | Not Available | Positive | 439964 - 440809 | 30290.7 |
| ribosomal protein s12 methylthiotransferase rimo | HMPREF9720_0817 | Not Available | Positive | 440913 - 442211 | 48850.4 |
| hypothetical protein | HMPREF9720_0818 | Not Available | Positive | 442291 - 442569 | 10675.9 |
| hypothetical protein | HMPREF9720_0819 | Not Available | Positive | 442666 - 442965 | 11318.4 |
| ymda/ytgf family protein | HMPREF9720_0820 | Not Available | Positive | 443183 - 444835 | 61832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
