Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 | HMPREF9720_0778 | Not Available | Negative | 408813 - 409253 | 15782.4 |
| transcription termination/antitermination factor nusg | HMPREF9720_0779 | Not Available | Negative | 409270 - 409830 | 21170.6 |
| preprotein translocase, sece subunit | HMPREF9720_0780 | Not Available | Negative | 409845 - 410042 | 7360.16 |
| Trna-trp | Not Available | Not Available | Positive | 410062 - 410135 | Not Available |
| translation elongation factor tu | HMPREF9720_0782 | Not Available | Negative | 410184 - 411371 | 43486.4 |
| Trna-gly | Not Available | Not Available | Positive | 411501 - 411576 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 411671 - 411756 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 411882 - 411955 | Not Available |
| acetyltransferase, gnat family | HMPREF9720_0786 | Not Available | Positive | 412294 - 412815 | 19462.3 |
| hypothetical protein | HMPREF9720_0787 | Not Available | Negative | 412923 - 413930 | 38798.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
