Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase, class i/ii | HMPREF9720_0768 | Not Available | Positive | 393743 - 394939 | 44783.0 |
| outer membrane protein transport protein, ompp1/fadl/todx family | HMPREF9720_0769 | Not Available | Positive | 395085 - 396617 | 55881.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 396678 - 396752 | Not Available |
| l-serine ammonia-lyase | HMPREF9720_0771 | Not Available | Positive | 396965 - 398170 | 42788.9 |
| hypothetical protein | HMPREF9720_0772 | Not Available | Negative | 398207 - 398362 | 5366.15 |
| dna-directed rna polymerase, beta' subunit | HMPREF9720_0773 | Not Available | Negative | 398746 - 403005 | 157818.0 |
| dna-directed rna polymerase, beta subunit | HMPREF9720_0774 | Not Available | Negative | 403042 - 406902 | 144126.0 |
| ribosomal protein l7/l12 | HMPREF9720_0775 | Not Available | Negative | 407147 - 407524 | 12738.3 |
| ribosomal protein l10 | HMPREF9720_0776 | Not Available | Negative | 407566 - 408090 | 18863.1 |
| ribosomal protein l1 | HMPREF9720_0777 | Not Available | Negative | 408108 - 408806 | 24897.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
