Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 20, catalytic domain protein | HMPREF9720_0229 | Not Available | Negative | 3430162 - 3432033 | 71314.9 |
| hypothetical protein | HMPREF9720_0230 | Not Available | Negative | 3432091 - 3433647 | 57208.9 |
| hypothetical protein | HMPREF9720_0231 | Not Available | Negative | 3433747 - 3435183 | 50014.6 |
| hypothetical protein | HMPREF9720_0232 | Not Available | Negative | 3435249 - 3437267 | 74009.2 |
| hypothetical protein | HMPREF9720_0717 | Not Available | Negative | 3437532 - 3439022 | 55081.1 |
| cellulase (glycosyl hydrolase family 5) | HMPREF9720_0235 | Not Available | Negative | 3439025 - 3440791 | 66329.9 |
| f5/8 type c domain protein | HMPREF9720_0236 | Not Available | Negative | 3440788 - 3441660 | 32829.5 |
| susd family protein | HMPREF9720_0237 | Not Available | Negative | 3441690 - 3443540 | 70750.6 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0238 | Not Available | Negative | 3443563 - 3446631 | 113246.0 |
| ser/thr phosphatase family protein | HMPREF9720_0239 | Not Available | Positive | 3446816 - 3447829 | 39000.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
