Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kap family p-loop domain protein | HMPREF9720_1592 | Not Available | Negative | 5001 - 7559 | 98891.9 |
| hypothetical protein | HMPREF9720_1593 | Not Available | Negative | 8243 - 8494 | 9783.91 |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 9404 - 9500 | Not Available |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_1519 | Not Available | Negative | 8952 - 9932 | 37556.2 |
| putative glycerol-3-phosphate dehydrogenase | HMPREF9720_1520 | Not Available | Negative | 9950 - 11005 | 38808.5 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_1521 | Not Available | Negative | 11033 - 11833 | 30000.1 |
| hypothetical protein | HMPREF9720_1522 | Not Available | Negative | 11883 - 14078 | 77538.6 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_1523 | Not Available | Negative | 14101 - 16170 | 74821.0 |
| hypothetical protein | HMPREF9720_1524 | Not Available | Negative | 16194 - 17699 | 56269.2 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1525 | Not Available | Negative | 17726 - 21313 | 132225.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
