Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0219 | Not Available | Positive | 3416375 - 3417202 | 31845.0 |
| amidohydrolase family protein | HMPREF9720_0220 | Not Available | Positive | 3417162 - 3418310 | 42264.6 |
| hypothetical protein | HMPREF9720_0221 | Not Available | Negative | 3418370 - 3419389 | 39348.6 |
| glycosyl hydrolase family 2, sugar binding domain protein | HMPREF9720_0222 | Not Available | Negative | 3419437 - 3420189 | 28075.5 |
| rna polymerase sigma-70 factor | HMPREF9720_0223 | Not Available | Positive | 3420287 - 3421018 | 27863.3 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0224 | Not Available | Positive | 3421089 - 3422087 | 36894.8 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0225 | Not Available | Positive | 3422213 - 3425770 | 131897.0 |
| susd family protein | HMPREF9720_0226 | Not Available | Positive | 3425790 - 3427577 | 67888.6 |
| hypothetical protein | HMPREF9720_0227 | Not Available | Positive | 3427597 - 3428916 | 46695.4 |
| bacterial group 2 ig-like protein | HMPREF9720_0228 | Not Available | Positive | 3428913 - 3429359 | 15853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
