Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | HMPREF9720_0174 | Not Available | Negative | 3371639 - 3373096 | 52687.0 |
| hypothetical protein | HMPREF9720_0175 | Not Available | Negative | 3373093 - 3373248 | 5434.31 |
| penicillin-binding protein, transpeptidase domain protein | HMPREF9720_0176 | Not Available | Negative | 3373250 - 3375514 | 85036.7 |
| hypothetical protein | HMPREF9720_0177 | Not Available | Negative | 3375521 - 3376036 | 20834.7 |
| s-adenosyl-methyltransferase mraw | HMPREF9720_0179 | Not Available | Negative | 3376089 - 3377195 | 40902.9 |
| acyltransferase | HMPREF9720_0178 | Not Available | Positive | 3377094 - 3377927 | 32214.4 |
| hypothetical protein | HMPREF9720_0180 | Not Available | Positive | 3377952 - 3378959 | 39535.3 |
| hypothetical protein | HMPREF9720_0181 | Not Available | Positive | 3379091 - 3379585 | 17696.2 |
| hypothetical protein | HMPREF9720_0182 | Not Available | Positive | 3379659 - 3380588 | 35319.6 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family | HMPREF9720_0183 | Not Available | Negative | 3380734 - 3381279 | 19803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
