Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | HMPREF9720_0164 | Not Available | Negative | 3361094 - 3362614 | 55169.1 |
| hypothetical protein | HMPREF9720_0165 | Not Available | Negative | 3362959 - 3364626 | 58907.1 |
| hypothetical protein | HMPREF9720_0166 | Not Available | Negative | 3364640 - 3364963 | 12146.5 |
| sigma-70 region 2 | HMPREF9720_0167 | Not Available | Negative | 3364960 - 3365520 | 21405.6 |
| ribosomal protein l25, ctc-form | HMPREF9720_0168 | Not Available | Positive | 3365727 - 3366296 | 20520.0 |
| aminoacyl-trna hydrolase | HMPREF9720_0169 | Not Available | Positive | 3366308 - 3366871 | 20627.0 |
| s4 domain protein | HMPREF9720_0170 | Not Available | Negative | 3367162 - 3367554 | 15106.0 |
| cell cycle protein, ftsw/roda/spove family | HMPREF9720_0171 | Not Available | Negative | 3367561 - 3369021 | 53608.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | HMPREF9720_0172 | Not Available | Negative | 3369026 - 3370375 | 48929.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HMPREF9720_0173 | Not Available | Negative | 3370378 - 3371622 | 45846.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
