Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_1871 | Not Available | Negative | 3349673 - 3350614 | 35562.1 |
| rna polymerase sigma-70 factor | HMPREF9720_1872 | Not Available | Negative | 3350712 - 3351248 | 21005.5 |
| hypothetical protein | HMPREF9720_2029 | Not Available | Negative | 3351405 - 3351995 | 22614.0 |
| hypothetical protein | HMPREF9720_0157 | Not Available | Positive | 3353465 - 3353590 | 4733.13 |
| homoserine kinase | HMPREF9720_0158 | Not Available | Positive | 3353906 - 3354832 | 31903.7 |
| threonine synthase | HMPREF9720_0159 | Not Available | Positive | 3354848 - 3356137 | 46554.9 |
| 3-isopropylmalate dehydrogenase | HMPREF9720_0160 | Not Available | Negative | 3356507 - 3357568 | 38493.0 |
| hmgl-like protein | HMPREF9720_0161 | Not Available | Negative | 3357558 - 3359099 | 57368.4 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF9720_0162 | Not Available | Negative | 3359110 - 3359703 | 22104.9 |
| 3-isopropylmalate dehydratase, large subunit | HMPREF9720_0163 | Not Available | Negative | 3359716 - 3361092 | 49197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
