Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, s9a/b/c family, catalytic domain protein | HMPREF9720_1851 | Not Available | Positive | 3325757 - 3327892 | 80726.8 |
| 6-o-methylguanine dna methyltransferase, dna binding domain protein | HMPREF9720_1852 | Not Available | Positive | 3327904 - 3328401 | 17935.7 |
| proton-translocating nadh-quinone oxidoreductase, chain n | HMPREF9720_1853 | Not Available | Negative | 3328578 - 3330005 | 51532.2 |
| proton-translocating nadh-quinone oxidoreductase, chain m | HMPREF9720_1854 | Not Available | Negative | 3330012 - 3331496 | 53709.7 |
| proton-translocating nadh-quinone oxidoreductase, chain l | HMPREF9720_1855 | Not Available | Negative | 3331509 - 3333401 | 69150.3 |
| nadh dehydrogenase subunit k | HMPREF9720_1856 | Not Available | Negative | 3333424 - 3333732 | 11890.0 |
| nadh-ubiquinone/plastoquinone oxidoreductase chain 6 | HMPREF9720_1857 | Not Available | Negative | 3333745 - 3334254 | 18400.1 |
| 4fe-4s binding domain protein | HMPREF9720_1858 | Not Available | Negative | 3334258 - 3334698 | 16465.1 |
| nadh dehydrogenase | HMPREF9720_1860 | Not Available | Negative | 3334701 - 3335777 | 40030.3 |
| hypothetical protein | HMPREF9720_1859 | Not Available | Positive | 3335742 - 3335984 | 8973.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
