Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | HMPREF9720_1831 | Not Available | Positive | 3305295 - 3306755 | 55194.6 |
| pkd domain protein | HMPREF9720_1832 | Not Available | Positive | 3306792 - 3308189 | 50332.2 |
| pkd domain protein | HMPREF9720_1833 | Not Available | Positive | 3308218 - 3310071 | 64948.1 |
| hypothetical protein | HMPREF9720_1834 | Not Available | Positive | 3310146 - 3312167 | 72174.4 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF9720_1835 | Not Available | Positive | 3312219 - 3313133 | 34185.2 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_1836 | Not Available | Positive | 3313143 - 3314027 | 33710.6 |
| transporter, major facilitator family protein | HMPREF9720_1837 | Not Available | Positive | 3314064 - 3315437 | 48873.1 |
| ompa-like transmembrane domain protein | HMPREF9720_1838 | Not Available | Positive | 3315687 - 3316217 | 19222.8 |
| Trna-val | Not Available | Not Available | Positive | 3316427 - 3316504 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3316551 - 3316628 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
