Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase, phage integrase family | HMPREF9720_1605 | Not Available | Positive | 3289741 - 3290943 | 46196.9 |
| tonb-dependent receptor plug domain protein | HMPREF9720_1822 | Not Available | Negative | 3291699 - 3292984 | 47095.9 |
| hypothetical protein | HMPREF9720_1823 | Not Available | Negative | 3293118 - 3293489 | 13979.6 |
| outer membrane efflux protein | HMPREF9720_1824 | Not Available | Negative | 3293942 - 3295264 | 49820.9 |
| rnd transporter, hae1 family | HMPREF9720_1825 | Not Available | Negative | 3295261 - 3298302 | 112495.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9720_1826 | Not Available | Negative | 3298315 - 3299397 | 39141.5 |
| hypothetical protein | HMPREF9720_1827 | Not Available | Positive | 3299591 - 3299833 | 8990.81 |
| rna polymerase sigma-70 factor | HMPREF9720_1828 | Not Available | Positive | 3299935 - 3300489 | 21685.3 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_1829 | Not Available | Positive | 3300631 - 3301614 | 37226.6 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1830 | Not Available | Positive | 3301721 - 3305281 | 130108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
